Publications

Total found: 83 records
Vu G., Schmutzer T., Bull F., Cao H., Fuchs J., Tran T., Jovtchev G., Pistrick K., Stein N., Pečinka A., Neumann P., Novák P., Macas J., Dear P., Blattner F., Scholz U., Schubert I. (2015) Comparative Genome Analysis Reveals Divergent Genome Size Evolution in a Carnivorous Plant Genus Plant Genome 8: DOI: 10.3835/plantgenome2015.04.0021
Clarke D., Novák P., Lake A., Shipkova P., Aranibar N., Robertson D., Severson P., Reily M., Futscher B., Lehman-Mckeeman L., Cherrington N. (2014) Characterization of Hepatocellular Carcinoma Related Genes and Metabolites in Human Nonalcoholic Fatty Liver Disease Digestive Diseases and Sciences 59: 365-374.
DOI: 10.1007/s10620-013-2873-9
Emadzade K., Jang T., Macas J., Kovařík A., Novák P., Parker J., Weiss-Schneeweiss H. (2014) Differential amplification of satellite PaB6 in chromosomally hyper-variable Prospero autumnale complex (Hyacinthaceae) Annals of botany 114 (8): 1597-1608.
DOI: 10.1093/aob/mcu178
Garbe J., Vrba , Sputova K., Fuchs L., Novák P., Brothman A., Jackson M., Chin K., Labarge M., Watts G., Futscher B., Stampfer M. (2014) Immortalization of normal human mammary epithelial cells in two steps by direct targeting of senescence barriers does not require gross genomic alterations Cell cycle 13: 3423-3435.
DOI: 10.4161/15384101.2014.954456
Medeiros M., Le T., Troup D., Novák P., Gandolfi A. (2014) Expression Of Selected Pathway-Marker Genes In Human Urothelial Cells Exposed Chronically To A Non-Cytotoxic Concentration Of Monomethylarsonous Acid Toxicology Reports 1: 421–434.
DOI: 10.1016/j.toxrep.2014.07.004
Novák P., Hardwick R., Flores-Keown B., Zhao F., Klimecki W., Cherrington N. (2014) The Adaptive Endoplasmic Reticulum Stress Response to Lipotoxicity in Progressive Human Nonalcoholic Fatty Liver Disease Toxicological Sciences 137: 26-34.
DOI: 10.1093/toxsci/kft230
Novák P., Hřibová E., Neumann P., Koblížková A., Doležel J., Macas J. (2014) Genome-wide analysis of repeat diversity across the family Musaceae PLoS ONE 9: e98918.
DOI: 10.1371/journal.pone.0098918
Zhang H., Koblížková A., Wang K., Gong Z., Oliveira L., Torres G., Wu Y., Zhang W., Novák P., Buell C., Macas J., Jiang J. (2014) Boom-bust turnovers of megabase-sized centromeric DNA in Solanum species: Rapid evolution of DNA sequences associated with centromeres Plant Cell 26: 1436-1447.
DOI: 10.1105/tpc.114.123877
Heckmann S., Macas J., Kumke K., Fuchs J., Schubert V., Ma L., Novák P., Neumann P., Taudien S., Platzer M., Houben A. (2013) The holocentric species Luzula elegans shows interplay between centromere and large-scale genome organization Plant Journal 73: 555-565.
DOI: 10.1111/tpj.12054
Klemme S., Banaei-Moghaddam A., Macas J., Wicker T., Novák P., Houben A. (2013) High-copy sequences reveal distinct evolution of the rye B chromosome New Phytologist 199: 550-558.
DOI: 10.1111/nph.12289
Kopecký D., Martis M., Cihalikova J., Hřibová E., Vrána J., Bartoš J., Kopecka J., Cattonaro F., Stoces S., Novák P., Neumann P., Macas J., Šimková H., Studer B., Asp T., Baird J., Navratil P., Karafiatova M., Kubaláková M., Safar J., Mayer K. (2013) Flow sorting and sequencing meadow fescue chromosome 4F Plant Physiology 163: 1323-1337.
Lake A., Novák P., Shipkova P., Aranibar N., Robertson D., Reily M., Lu Z., Lehman-Mckeeman L., Cherrington N. (2013) Decreased hepatotoxic bile acid composition and altered synthesis in progressive human nonalcoholic fatty liver disease Toxicology and Applied Pharmacology 268: 132-140.
DOI: 10.1016/j.taap.2013.01.022
Novák P., Neumann P., Pech J., Steinhaisl J., Macas J. (2013) RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads Bioinformatics 29: 792-793.
DOI: 10.1093/bioinformatics/btt054
Renny-Byfield S., Kovařík A., Kelly L., Macas J., Novák P., Chase M., Nichols R., Pancholi M., Grandbastien M., Leitch A. (2013) Diploidization and genome size change in allopolyploids is associated with differential dynamics of low- and high-copy sequences. Plant Journal 74: 829-839.
DOI: 10.1111/tpj.12168
Šteflová P., Tokan V., Vogel I., Lexa M., Macas J., Novák P., Hobza R., Vyskot B., Kejnovský E. (2013) Contrasting Patterns of Transposable Element and Satellite Distribution on Sex Chromosomes (XY1Y2) in the Dioecious Plant Rumex acetosa Genome Biology and Evolution 5: 769-782.
DOI: 10.1093/gbe/evt049
Gong Z., Wu Y., Koblížková A., Torres G., Wang K., Iovene M., Neumann P., Zhang W., Novák P., Buell C., Macas J., Jiang J. (2012) Repeatless and repeat-based centromeres in potato: implications for centromere evolution Plant Cell 24: 3559-3574.
DOI: 10.1105/tpc.112.100511
Martis M., Klemme S., Banaei-Moghaddam A., Blattner F., Macas J., Schmutzer T., Scholz U., Gundlach H., Wicker T., Šimková H., Novák P., Neumann P., Kubaláková M., Bauer E., Haseneyer G., Fuchs J., Doležel J., Stein N., Mayer K., Houben A. (2012) Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences Proceedings of the National Academy of Sciences of the United States of America 109: 13343-13346.
DOI: 10.1073/pnas.1204237109
Medeiros M., Zheng X., Novák P., Wnek S., Chyan V., Escudero-Lourdes C., Gandolfi A. (2012) Global gene expression changes in human urothelial cells exposed to low-level monomethylarsonous acid Toxicology 291: 102-112.
DOI: 10.1016/j.tox.2011.11.002
Neumann P., Navrátilová A., Schroeder-Reiter E., Koblížková A., Steinbauerová V., Chocholová E., Novák P., Wanner G., Macas J. (2012) Stretching the Rules: Monocentric Chromosomes with Multiple Centromere Domains. PLoS Genetics 8: e1002777.
DOI: 10.1371/journal.pgen.1002777
Novák P., Stampfer M., Munoz-Rodriguez J., Garbe J., Ehrich M., Futscher B., Jensen T. (2012) Cell-type specific DNA methylation patterns define human breast cellular identity PLoS ONE 7: e52299.
DOI: 10.1371/journal.pone.0052299

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Biology Centre CAS
Institute of Plant Molecular Biology
Branišovská 1160/31
370 05 České Budějovice

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