Publications

Total found: 83 records
Tulpová Z., Toegelová H., Lapitan N.L.V., Peairs F.B., Macas J., Novák P., Lukaszewski A.J., Kopecký D., Mazáčová M., Vrána J., Holušová K., Leroy P., Doležel J., Šimková H. (2019) Accessing a Russian Wheat Aphid Resistance Gene in Bread Wheat by Long-Read Technologies The Plant Genome 12 (2): DOI: 10.3835/ plantgenome2018.09.0065
Wu D.D., Ruban A., Fuchs J., Macas J., Novák P., Vaio M., Zhou Y.H., Houben A. (2019) Nondisjunction and unequal spindle organization accompany the drive of Aegilops speltoides B chromosomes New Phytologist 223: 1340–1352.
DOI: 10.1111/nph.15875
Avila Robledillo L., Koblížková A., Novák P., Böttinger K., Vrbová I., Neumann P., Schubert I., Macas J. (2018) Satellite DNA in Vicia faba is characterized by remarkable diversity in its sequence composition, association with centromeres, and replication timing Scientific Reports 8: 5838.
DOI: 10.1038/s41598-018-24196-3
McCann J., Jang T., Macas J., Schneeweiss G., Matzke N.J., Novák P., Stuessy T.F., Villasenor J.L., Weiss-Schneeweiss H. (2018) Dating the Species Network: Allopolyploidy and Repetitive DNA Evolution in American Daisies (Melampodium sect. Melampodium, Asteraceae) Systematic Biology 67 (6): 1010–1024.
DOI: 10.1093/sysbio/syy024
Clarke J.D., Novák P., Lake A., Hardwick R., Cherrington N. (2017) Impaired N-linked glycosylation of uptake and efflux transporters in human non-alcoholic fatty liver disease Liver International 37 (7): 1074-1081.
DOI: 10.1111/liv.13362
Han J.H., Dzierlenga A.L., Lu Z., Billheimer D., Torabzadeh E., Lake A., Li H., Novák P., Shipkova P., Aranibar N. (2017) Metabolomic Profiling Distinction of Human Nonalcoholic Fatty Liver Disease Progression from a Common Rat Model Obesity 26 (6): 1069-1076.
DOI: 10.1002/oby.21855
Novák P., Avila Robledillo L., Koblížková A., Vrbová I., Neumann P., Macas J. (2017) TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads Nucleic Acids Research 45 (12): e11.
DOI: 10.1093/nar/gkx257
Ribeiro T., Marques A., Novák P., Schubert V., Vanzela A., Macas J., Houben A., Pedrosa-Harand A. (2017) Centromeric and non-centromeric satellite DNA organisation differs in holocentric Rhynchospora species Chromosoma 126: 325-335.
DOI: 10.1007/s00412-016-0616-3
Wang G., He Q., Macas J., Novák P., Neumann P., Meng D., Zhao H., Guo N., Han S., Zong M., Jin W., Liu F. (2017) Karyotypes and distribution of tandem repeat sequences in Brassica nigra determined by fluorescence in situ hybridization Cytogenetics and genome research 152: 158-165.
DOI: 10.1159/000479179
Lake A., Chaput A.L., Novák P., Cherrington N., Smith C.L. (2016) Transcription factor binding site enrichment analysis predicts drivers of altered gene expression in nonalcoholic steatohepatitis Biochemical Pharmacology 122: 62-71.
DOI: 10.1016/j.bcp.2016.11.006
Dodsworth S., Chase M., Kelly L., Leitch I., Novák P., Macas J., Piednoël M., Weiss-Schneeweiss H., Leitch A. (2015) Genomic Repeat Abundances Contain Phylogenetic Signal Systematic biology 64: 112-126.
DOI: 10.1093/sysbio/syu080
Kelly L., Renny-Byfield S., Pellicer J., Macas J., Novák P., Neumann P., Lysák M., Day P., Berger M., Fay M., Nichols R., Leitch A., Leitch I. (2015) Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size New Phytologist 208: 596-607.
DOI: 10.1111/nph.13471
Lake A., Novák P., Shipkova P., Aranibar N., Robertson D., Reily M., Lehman-Mckeeman L., Vaillancourt R., Cherrington N. (2015) Branched chain amino acid metabolism profiles in progressive human nonalcoholic fatty liver disease Amino Acids 47: 603-615.
DOI: 10.1007/s00726-014-1894-9
Lang J., Zhu W.Z., Nokes B., Sheth G., Novák P., Fuchs L., Watts G., Futscher B., Mineyev N., Ring A., Lebeau L., Nagle R., Cranmer L. (2015) Characterization of a Novel Radiation-Induced Sarcoma Cell Line Journal of Surgical Oncology 111: 669-682.
DOI: 10.1002/jso.23860
Lang J., Scott J., Wolf D.M., Novák P., Punj V., Magbanua M., Zhu W., Mineyev N., Haqq C., Crothers J., Esserman L., Tripathy D., Veer L., Park J. (2015) Expression profiling of circulating tumor cells in metastatic breast cancer Breast Cancer Research and Treatment 149: 121-131.
DOI: 10.1007/s10549-014-3215-0
Macas J., Novák P., Pellicer J., Čížková J., Koblížková A., Neumann P., Fuková I., Doležel J., Kelly L., Leitch I. (2015) In Depth Characterization of Repetitive DNA in 23 Plant Genomes Reveals Sources of Genome Size Variation in the Legume Tribe Fabeae PLoS ONE 10 (11): e0143424.
DOI: 10.1371/journal.pone.0143424
Marques A., Ribeiro T., Neumann P., Macas J., Novák P., Schubert V., Pellino M., Fuchs J., Ma W., Kuhlmann M., Brandt R., Vanzela A., Beseda T., Šimková H., Pedrosa-Harand A., Houben A. (2015) Holocentromeres in Rhynchospora are associated with genome-wide centromere-specific repeat arrays interspersed among euchromatin Proceedings of the National Academy of Sciences of the United States of America 112: 13633-13638.
DOI: 10.1073/pnas.1512255112
Neumann P., Pavliková Z., Koblížková A., Fuková I., Jedličková V., Novák P., Macas J. (2015) Centromeres off the hook: massive changes in centromere size and structure following duplication of CenH3 gene in Fabeae species Molecular biology and evolution 32 (7): 1862-1879.
DOI: 10.1093/molbev/msv070
Tran T., Cao H., Jovtchev G., Neumann P., Novák P., Fojtová M., Vu G., Macas J., Fajkus J., Schubert I., Fuchs J. (2015) Centromere and telomere sequence alterations reflect the rapid genome evolution within the carnivorous plant genus Genlisea Plant Journal 84 (6): 1087-1099.
DOI: http://dx.doi.org/10.1111/tpj.13058
Tran T., Cao H., Jovtchev G., Novák P., Vu G., Macas J., Schubert I., Fuchs J. (2015) Chromatin organization and cytological features of carnivorous Genlisea species with large genome size differences Frontiers in Plant Science 6: 613.

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Biology Centre CAS
Institute of Plant Molecular Biology
Branišovská 1160/31
370 05 České Budějovice

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