Total found: 126 records
Neumann P., Navrátilová A., Schroeder-Reiter E., Koblížková A., Steinbauerová V., Chocholová E., Novák P., Wanner G., Macas J. (2012) Stretching the Rules: Monocentric Chromosomes with Multiple Centromere Domains. PLoS Genetics 8: e1002777.
DOI: 10.1371/journal.pgen.1002777
Pagán H., Macas J., Novák P., Mcculloch E., Stevens R., Ray D. (2012) Survey Sequencing Reveals Elevated DNA Transposon Activity, Novel Elements, and Variation in Repetitive Landscapes among Vesper Bats Genome Biology and Evolution 4: 575-585.
DOI: 10.1093/gbe/evs038
Piednoël M., Aberer A., Schneeweiss G., Macas J., Novák P., Gundlach H., Temsch E., Renner S. (2012) Next-Generation Sequencing Reveals the Impact of Repetitive DNA Across Phylogenetically Closely Related Genomes of Orobanchaceae Molecular Biology and Evolution 29: 3601-3611.
DOI: 10.1093/molbev/mss168
Ambrožová K., Mandáková T., Bureš P., Neumann P., Leitch I., Koblížková A., Macas J., Lysák M. (2011) Diverse retrotransposon families and an AT-rich satellite DNA revealed in giant genomes of Fritillaria lilies Annals of Botany 107: 255-268.
DOI: 10.1093/aob/mcq235
Macas J., Kejnovský E., Neumann P., Novák P., Koblížková A., Vyskot B. (2011) Next Generation Sequencing-Based Analysis of Repetitive DNA in the Model Dioceous Plant Silene latifolia PLoS ONE 6: e27335.
DOI: 10.1371/journal.pone.0027335
Neumann P., Navrátilová A., Koblížková A., Kejnovský E., Hřibová E., Hobza R., Widmer A., Doležel J., Macas J. (2011) Plant centromeric retrotransposons: a structural and cytogenetic perspective Mobile DNA 2: DOI: 10.1186/1759-8753-2-4
Steinbauerová V., Neumann P., Novák P., Macas J. (2011) A widespread occurrence of extra open reading frames in plant Ty3/gypsy retrotransposons Genetica 139: 1543-1555.
DOI: 10.1007/s10709-012-9654-9
Hřibová E., Neumann P., Matsumoto T., Roux N., Macas J., Doležel J. (2010) Repetitive part of the banana (Musa acuminata) genome investigated by low-depth 454 sequencing BMC Plant Biology 10: 1-10.
DOI: 10.1186/1471-2229-10-204
Macas J., Neumann P., Novák P., Jiang J. (2010) Global sequence characterization of rice centromeric satellite based on oligomer frequency analysis in large-scale sequencing data Bioinformatics 26: 2101-2108.
DOI: 10.1093/bioinformatics/btq343
Novák P., Neumann P., Macas J. (2010) Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data BMC Bioinformatics 11: 378-389.
DOI: 10.1186/1471-2105-11-378
Macas J., Koblížková A., Navrátilová A., Neumann P. (2009) Hypervariable 3' UTR region of plant LTR-retrotransposons as a source of novel satellite repeats Gene 448: 198-206.
DOI: 10.1016/j.gene.2009.06.014
Smýkal P., Kalendar R., Ford R., Macas J., Griga M. (2009) Evolutionary conserved lineage of Angela-family retrotransposons as a genome-wide microsatellite repeat dispersal agent Heredity 103: 157-167.
DOI: 10.1038/hdy.2009.45
Čermák T., Kubát Z., Hobza R., Koblížková A., Widmer A., Macas J., Vyskot B., Kejnovský E. (2008) Survey of repetitive sequences in Silene latifolia with respect to their distribution on sex chromosomes Chromosome Research 16: 961-976.
DOI: 10.1007/s10577-008-1254-2
Navrátilová A., Koblížková A., Macas J. (2008) Survey of extrachromosomal circular DNA derived from plant satellite repeats BMC Plant Biology 8: 90.
DOI: 10.1186/1471-2229-8-90
Steinbauerová V., Neumann P., Macas J. (2008) Experimental evidence for splicing of intron-containing transcripts of plant LTRL retrotransposon Ogre Molecular Genetics and Genomics 280: 427-436.
DOI: 10.1007/s00438-008-0376-8
Hřibová E., Doleželová M., Town C., Macas J., Doležel J. (2007) Isolation and characterization of the highly repeated fraction of the banana genome Cytogenetics and Genome Research 119: 268-274.
Lermontova I., Schubert V., Bornke F., Macas J., Schubert I. (2007) Arabidopsis CBF5 interacts with the H/ACA snoRNP assembly factor NAF1 Plant Molecular Biology 65: 615-626.
Macas J., Neumann P. (2007) Ogre elements - a distinct group of plant Ty3/gypsy-like retrotransposons Gene 390: 108-116.
Macas J., Neumann P., Navrátilová A. (2007) Repetitive DNA in the pea (Pisum sativum L.) genome: comprehensive characterization using 454 sequencing and comparison to soybean and Medicago truncatula BMC Genomics 8: 427.
Lee H., Neumann P., Macas J., Jiang J. (2006) Transcription and evolutionary dynamics of the centromeric satellite repeat CentO in rice Molecular Biology and Evolution 23: 2505-2520.


Biology Centre CAS
Institute of Plant Molecular Biology
Branišovská 1160/31
370 05 České Budějovice

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