Total found: 126 records
Kelly L., Renny-Byfield S., Pellicer J., Macas J., Novák P., Neumann P., Lysák M., Day P., Berger M., Fay M., Nichols R., Leitch A., Leitch I. (2015) Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size New Phytologist 208: 596-607.
DOI: 10.1111/nph.13471
Macas J., Novák P., Pellicer J., Čížková J., Koblížková A., Neumann P., Fuková I., Doležel J., Kelly L., Leitch I. (2015) In Depth Characterization of Repetitive DNA in 23 Plant Genomes Reveals Sources of Genome Size Variation in the Legume Tribe Fabeae PLoS ONE 10 (11): e0143424.
DOI: 10.1371/journal.pone.0143424
Marques A., Ribeiro T., Neumann P., Macas J., Novák P., Schubert V., Pellino M., Fuchs J., Ma W., Kuhlmann M., Brandt R., Vanzela A., Beseda T., Šimková H., Pedrosa-Harand A., Houben A. (2015) Holocentromeres in Rhynchospora are associated with genome-wide centromere-specific repeat arrays interspersed among euchromatin Proceedings of the National Academy of Sciences of the United States of America 112: 13633-13638.
DOI: 10.1073/pnas.1512255112
Neumann P., Pavliková Z., Koblížková A., Fuková I., Jedličková V., Novák P., Macas J. (2015) Centromeres off the hook: massive changes in centromere size and structure following duplication of CenH3 gene in Fabeae species Molecular biology and evolution 32 (7): 1862-1879.
DOI: 10.1093/molbev/msv070
Tran T., Cao H., Jovtchev G., Neumann P., Novák P., Fojtová M., Vu G., Macas J., Fajkus J., Schubert I., Fuchs J. (2015) Centromere and telomere sequence alterations reflect the rapid genome evolution within the carnivorous plant genus Genlisea Plant Journal 84 (6): 1087-1099.
Tran T., Cao H., Jovtchev G., Novák P., Vu G., Macas J., Schubert I., Fuchs J. (2015) Chromatin organization and cytological features of carnivorous Genlisea species with large genome size differences Frontiers in Plant Science 6: 613.
Vu G., Schmutzer T., Bull F., Cao H., Fuchs J., Tran T., Jovtchev G., Pistrick K., Stein N., Pečinka A., Neumann P., Novák P., Macas J., Dear P., Blattner F., Scholz U., Schubert I. (2015) Comparative Genome Analysis Reveals Divergent Genome Size Evolution in a Carnivorous Plant Genus Plant Genome 8: DOI: 10.3835/plantgenome2015.04.0021
Weiss-Schneeweiss H., Leicht A., McCann J., Jang T., Macas J. (2015) Employing next generation sequencing to explore the repeat landscape of the plant genome. Next-Generation Sequencing in Plant Systematics. Koenigstein : Koeltz Scientific Books, 2015 - (Hörandl, E.; Appelhans, M.) ISBN 978-3-87429-492-8: 155-179.
Emadzade K., Jang T., Macas J., Kovařík A., Novák P., Parker J., Weiss-Schneeweiss H. (2014) Differential amplification of satellite PaB6 in chromosomally hyper-variable Prospero autumnale complex (Hyacinthaceae) Annals of botany 114 (8): 1597-1608.
DOI: 10.1093/aob/mcu178
Novák P., Hřibová E., Neumann P., Koblížková A., Doležel J., Macas J. (2014) Genome-wide analysis of repeat diversity across the family Musaceae PLoS ONE 9: e98918.
DOI: 10.1371/journal.pone.0098918
Zhang H., Koblížková A., Wang K., Gong Z., Oliveira L., Torres G., Wu Y., Zhang W., Novák P., Buell C., Macas J., Jiang J. (2014) Boom-bust turnovers of megabase-sized centromeric DNA in Solanum species: Rapid evolution of DNA sequences associated with centromeres Plant Cell 26: 1436-1447.
DOI: 10.1105/tpc.114.123877
Heckmann S., Macas J., Kumke K., Fuchs J., Schubert V., Ma L., Novák P., Neumann P., Taudien S., Platzer M., Houben A. (2013) The holocentric species Luzula elegans shows interplay between centromere and large-scale genome organization Plant Journal 73: 555-565.
DOI: 10.1111/tpj.12054
Klemme S., Banaei-Moghaddam A., Macas J., Wicker T., Novák P., Houben A. (2013) High-copy sequences reveal distinct evolution of the rye B chromosome New Phytologist 199: 550-558.
DOI: 10.1111/nph.12289
Novák P., Neumann P., Pech J., Steinhaisl J., Macas J. (2013) RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads Bioinformatics 29: 792-793.
DOI: 10.1093/bioinformatics/btt054
Renny-Byfield S., Kovařík A., Kelly L., Macas J., Novák P., Chase M., Nichols R., Pancholi M., Grandbastien M., Leitch A. (2013) Diploidization and genome size change in allopolyploids is associated with differential dynamics of low- and high-copy sequences. Plant Journal 74: 829-839.
DOI: 10.1111/tpj.12168
Banaei-Moghaddam A., Schubert V., Kumke K., Weiβ O., Klemme S., Nagaki K., Macas J., González-Sánchez M., Heredia V., Gómez-Revilla D., González-García M., Vega J., Puertas-Houben A. (2012) Nondisjunction in Favor of a Chromosome: The Mechanism of Rye B Chromosome Drive during Pollen Mitosis Plant Cell 24: 4124-4134.
Gong Z., Wu Y., Koblížková A., Torres G., Wang K., Iovene M., Neumann P., Zhang W., Novák P., Buell C., Macas J., Jiang J. (2012) Repeatless and repeat-based centromeres in potato: implications for centromere evolution Plant Cell 24: 3559-3574.
DOI: 10.1105/tpc.112.100511
Kelly L., Leitch A., Fay M., Renny-Byfield S., Pellicer J., Macas J., Leitch I. (2012) Why size really matters when sequencing plant genomes Plant Ecology & Diversity 5: 415-524.
DOI: 10.1080/17550874.2012.716868
Martis M., Klemme S., Banaei-Moghaddam A., Blattner F., Macas J., Schmutzer T., Scholz U., Gundlach H., Wicker T., Šimková H., Novák P., Neumann P., Kubaláková M., Bauer E., Haseneyer G., Fuchs J., Doležel J., Stein N., Mayer K., Houben A. (2012) Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences Proceedings of the National Academy of Sciences of the United States of America 109: 13343-13346.
DOI: 10.1073/pnas.1204237109
Matyášek R., Renny-Byfield S., Fulneček J., Macas J., Grandbastien M., Nichols R., Kovařík A., Leitch A. (2012) Next generation sequencing analysis reveals a relationship between rDNA unit diversity and locus number in Nicotiana diploids BMC Genomics 13: 722.
DOI: 10.1186/1471-2164-13-722


Biology Centre CAS
Institute of Plant Molecular Biology
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