Total found: 124 records
Edwards A., Njaci I., Sarkar A., Jiang Z., Kaithakottil G.G., Moore C., Cheema J., Stevenson C.E.M., Rejzek M., Novák P., Vigouroux M., Vickers M., Wouters R.H.M., Paajanen P., Steurnagel B., Moore J.D., Higgins J., Swarbreck D., Martens S., Kim C.Y., Weng J.-K., Mundree S., Kilian B., Kumar S., Loose M., Yant L., Macas J., Wang T.L., Martin C., Emmrich P.M.F. (2023) Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus Nature Communications 14: 876.
DOI: 10.1038/s41467-023-36503-2
Jayakodi M., Golicz A.A., Kreplak J., Fechete L.I., ..., Koblížková A., Neumann P., Novák P., Avila Robledillo L., Macas J., et al. (2023) The giant diploid faba genome unlocks variation in a global protein crop Nature on-line first: DOI: 10.1038/s41586-023-05791-5
Macas J., Avila Robledillo L., Kreplak J., Novák P., Koblížková A., Vrbová I., Burstin J., Neumann P. (2023) Assembly of the 81.6 Mb centromere of pea chromosome 6 elucidates the structure and evolution of metapolycentric chromosomes PLoS Genetics 19(2): e1010633.
DOI: 10.1371/journal.pgen.1010633
Ellis N., Vaz Patto M., Rubiales D., Macas J., Novák P., Kumar S., Hao X., Edwards A., Sarkar A., Emmrich P. (2022) Grasspea In: Chapman, M.A. (eds) Underutilised Crop Genomes. Compendium of Plant Genomes. Springer, Cham. 217–228.
DOI: 10.1007/978-3-031-00848-1_12
Hofstatter P.G., Thangavel G., Lux T., Neumann P., Vondrak T., Novák P., Zhang M., Costa L., Castellani M., Scott A., Toegelová H., Fuchs J., Mata-Sucre Y., Dias Y., Vanzela A., Huettel B., Almeida C.C.S., Šimková H., Souza G., Pedrosa-Harand A., Macas J., Mayer K., Houben A., Marques A. (2022) Repeat-based holocentromeres influence genome architecture and karyotype evolution Cell 185: 1-16.
DOI: 10.1016/j.cell.2022.06.045
Schley R.J., Pellicer J., Ge X.-J., Barrett C., Bellot S., Guignard M.S., Novák P., Suda J., Fraser D., Baker W.J., Dodsworth S., Macas J., Leitch A., Leitch I. (2022) The ecology of palm genomes: repeat-associated genome size expansion is constrained by aridity New Phytologist 236(2): 433-446.
DOI: 10.1111/nph.18323
Tulpová Z., Kovařík A., Toegelová H., Navrátilová P., Kapustová V., Hřibová E., Vrána J., Macas J., Doležel J., Šimková H. (2022) Fine structure and transcription dynamics of bread wheat ribosomal DNA loci deciphered by a multi-omics approach The Plant Genome 15(1): e20191.
DOI: 10.1002/tpg2.20191
Hoang P.T.N., Rouillard J.M., Macas J., Kubalová I., Schubert V., Schubert I. (2021) Limitation of current probe design for oligo-cross-FISH, exemplified by chromosome evolution studies in duckweeds Chromosoma 130: 15-25.
DOI: 10.1007/s00412-020-00749-2
Neumann P., Oliveira L., Čížková J., Jang T., Klemme S., Novák P., Stelmach K., Koblížková A., Doležel J., Macas J. (2021) Impact of parasitic lifestyle and different types of centromere organization on chromosome and genome evolution in the plant genus Cuscuta New Phytologist 229: 2365–2377.
DOI: 10.1111/nph.17003
Vondrak T., Oliveira L., Novák P., Koblížková A., Neumann P., Macas J. (2021) Complex sequence organization of heterochromatin in the holocentric plant Cuscuta europaea elucidated by the computational analysis of nanopore reads Computational and Structural Biotechnology Journal 19: 2179-2189.
DOI: 0.1016/j.csbj.2021.04.011
Ainouche A., Paris A., Giraud D., Keller J., Raimondeau P., Mahé P., Neumann P., Novák P., Macas J., Ainouche M., Salmon A., Martin G.E. (2020) The Repetitive Content in Lupin Genomes In: Singh K., Kamphuis L., Nelson M. (eds) The Lupin Genome. Compendium of Plant Genomes. 161-168.
Avila Robledillo L., Neumann P., Koblížková A., Novák P., Vrbová I., Macas J. (2020) Extraordinary sequence diversity and promiscuity of centromeric satellites in the legume tribe Fabeae Molecular biology and evolution 37: 2341-2356.
DOI: 10.1093/molbev/msaa090
Burstin J., Kreplak J., Macas J., Lichtenzveig J. (2020) Pisum sativum (Pea). Genome of the Month. Trends in Genetics 36: 312-313.
DOI: 10.1016/j.tig.2019.12.009
Hoang P.T.N., Fiebig A., Novák P., Macas J., Cao H., Stepanenko A., Chen G., Borisjuk N., Scholz U., Schubert I. (2020) Chromosome-scale genome assembly for the duckweed /Spirodela intermedia/, integrating cytogenetic maps, PacBio and Oxford Nanopore libraries Scientific Reports 10: 19230.
DOI: 10.1038/s41598-020-75728-9
McCann J., Macas J., Novák P., Stuessy T.F., Villasenor J.L., Weiss-Schneeweiss H. (2020) Differential Genome Size and Repetitive DNA Evolution in Diploid Species of Melampodium sect. Melampodium (Asteraceae) Frontiers in Plant Science 11: 362.
DOI: 10.3389/fpls.2020.00362
Novák P., Guignard M.S., Neumann P., Kelly L., Mlinarec J., Koblížková A., Dodsworth S., Kovařík A., Pellicer J., Wang W., Macas J., Leicht I.J., Leicht A. (2020) Repeat-sequence turnover shifts fundamentally in species with large genomes Nature Plants 6: 1325–1329.
DOI: 10.1038/s41477-020-00785-x
Novák P., Neumann P., Macas J. (2020) Global analysis of repetitive DNA from unassembled sequence reads using RepeatExplorer2 Nature Protocols 15: 3745-3776.
DOI: 10.1038/s41596-020-0400-y
Oliveira L., Neumann P., Jang T., Klemme S., Schubert V., Koblížková A., Houben A., Macas J. (2020) Mitotic spindle attachment to the holocentric chromosomes of Cuscuta europaea does not correlate with the distribution of CENH3 chromatin Frontiers in plant science 10: 1799.
DOI: 10.3389/fpls.2019.01799
Schubert V., Neumann P., Marques A., Heckmann S., Macas J., Pedrosa-Harand A., Schubert I., Jang T., Houben A. (2020) Super-Resolution Microscopy Reveals Diversity of Plant Centromere Architecture International Journal of Molecular Sciences 21 (10): 3488.
DOI: 10.3390/ijms21103488
Vondrak T., Avila Robledillo L., Novák P., Koblížková A., Neumann P., Macas J. (2020) Characterization of repeat arrays in ultra‐long nanopore reads reveals frequent origin of satellite DNA from retrotransposon‐derived tandem repeats The Plant Journal 101: 484–500.
DOI: 10.1111/tpj.14546


Biology Centre CAS
Institute of Plant Molecular Biology
Branišovská 1160/31
370 05 České Budějovice

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