Ing. Petr Novák, Ph.D.

Funkce: Vědecký pracovník - Molekulární cytogenetika

Kontaktní údaje

Telefon: 420387775575
E-mail: petr@umbr.cas.cz
Web: w3lamc.umbr.cas.cz/lamc/
Místnost: 147

Publikace
Celkem nalezeno: 54 záznamů
Novák P., Avila Robledillo L., Koblížková A., Vrbová I., Neumann P., Macas J. (2017) TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads Nucleic Acids Research DOI: 10.1093/nar/gkx257
Ribeiro T., Marques A., Novák P., Schubert V., Vanzela A., Macas J., Houben A., Pedrosa-Harand A. (2017) Centromeric and non-centromeric satellite DNA organisation differs in holocentric Rhynchospora species Chromosoma 126 : 325-335.
DOI: 10.1007/s00412-016-0616-3
Dodsworth S., Chase M., Kelly L., Leitch I., Novák P., Macas J., Piednoël M., Weiss-Schneeweiss H., Leitch A. (2015) Genomic Repeat Abundances Contain Phylogenetic Signal Systematic biology 64 : 112-126.
DOI: 10.1093/sysbio/syu080
Kelly L., Renny-Byfield S., Pellicer J., Macas J., Novák P., Neumann P., Lysák M., Day P., Berger M., Fay M., Nichols R., Leitch A., Leitch I. (2015) Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size New Phytologist 208 : 596-607.
DOI: 10.1111/nph.13471
Lake A., Novák P., Shipkova P., Aranibar N., Robertson D., Reily M., Lehman-Mckeeman L., Vaillancourt R., Cherrington N. (2015) Branched chain amino acid metabolism profiles in progressive human nonalcoholic fatty liver disease Amino Acids 47 : 603-615.
DOI: 10.1007/s00726-014-1894-9
Lang J., Scott J., Wolf D., Novák P., Punj V., Magbanua M., Zhu W., Mineyev N., Haqq C., Crothers J., Esserman L., Tripathy D., Veer L., Park J. (2015) Expression profiling of circulating tumor cells in metastatic breast cancer Breast Cancer Research and Treatment 149 : 121-131.
DOI: 10.1007/s10549-014-3215-0
Macas J., Novák P., Pellicer J., Čížková J., Koblížková A., Neumann P., Fuková I., Doležel J., Kelly L., Leitch I. (2015) In Depth Characterization of Repetitive DNA in 23 Plant Genomes Reveals Sources of Genome Size Variation in the Legume Tribe Fabeae PLoS ONE 10 (11) : e0143424.
DOI: 10.1371/journal.pone.0143424
Marques A., Ribeiro T., Neumann P., Macas J., Novák P., Schubert V., Pellino M., Fuchs J., Ma W., Kuhlmann M., Brandt R., Vanzela A., Beseda T., Šimková H., Pedrosa-Harand A., Houben A. (2015) Holocentromeres in Rhynchospora are associated with genome-wide centromere-specific repeat arrays interspersed among euchromatin Proceedings of the National Academy of Sciences of the United States of America 112 : 13633-13638.
DOI: 10.1073/pnas.1512255112
Neumann P., Pavliková Z., Koblížková A., Fuková I., Jedličková V., Novák P., Macas J. (2015) Centromeres off the hook: massive changes in centromere size and structure following duplication of CenH3 gene in Fabeae species Molecular biology and evolution 32 (7) : 1862-1879.
DOI: 10.1093/molbev/msv070
Tran T., Cao H., Jovtchev G., Neumann P., Novák P., Fojtová M., Vu G., Macas J., Fajkus J., Schubert I., Fuchs J. (2015) Centromere and telomere sequence alterations reflect the rapid genome evolution within the carnivorous plant genus Genlisea Plant Journal 84 (6) : 1087-1099.
DOI: http://dx.doi.org/10.1111/tpj.13058
Tran T., Cao H., Jovtchev G., Novák P., Vu G., Macas J., Schubert I., Fuchs J. (2015) Chromatin organization and cytological features of carnivorous Genlisea species with large genome size differences Frontiers in Plant Science 6 : 613.
Vu G., Schmutzer T., Bull F., Cao H., Fuchs J., Tran T., Jovtchev G., Pistrick K., Stein N., Pečinka A., Neumann P., Novák P., Macas J., Dear P., Blattner F., Scholz U., Schubert I. (2015) Comparative Genome Analysis Reveals Divergent Genome Size Evolution in a Carnivorous Plant Genus Plant Genome 8 : DOI: 10.3835/plantgenome2015.04.0021
Clarke D., Novák P., Lake A., Shipkova P., Aranibar N., Robertson D., Severson P., Reily M., Futscher B., Lehman-Mckeeman L., Cherrington N. (2014) Characterization of Hepatocellular Carcinoma Related Genes and Metabolites in Human Nonalcoholic Fatty Liver Disease Digestive Diseases and Sciences 59 : 365-374.
DOI: 10.1007/s10620-013-2873-9
Emadzade K., Jang T., Macas J., Kovařík A., Novák P., Parker J., Weiss-Schneeweiss H. (2014) Differential amplification of satellite PaB6 in chromosomally hyper-variable Prospero autumnale complex (Hyacinthaceae) Annals of botany 114 (8) : 1597-1608.
DOI: 10.1093/aob/mcu178
Garbe J., Vrba , Sputova K., Fuchs L., Novák P., Brothman A., Jackson M., Chin K., Labarge M., Watts G., Futscher B., Stampfer M. (2014) Immortalization of normal human mammary epithelial cells in two steps by direct targeting of senescence barriers does not require gross genomic alterations Cell cycle 13 : 3423-3435.
DOI: 10.4161/15384101.2014.954456
Medeiros M., Le T., Troup D., Novák P., Gandolfi A. (2014) Expression Of Selected Pathway-Marker Genes In Human Urothelial Cells Exposed Chronically To A Non-Cytotoxic Concentration Of Monomethylarsonous Acid Toxicology Reports 1 : 421–434.
DOI: 10.1016/j.toxrep.2014.07.004
Novák P., Hardwick R., Flores-Keown B., Zhao F., Klimecki W., Cherrington N. (2014) The Adaptive Endoplasmic Reticulum Stress Response to Lipotoxicity in Progressive Human Nonalcoholic Fatty Liver Disease Toxicological Sciences 137 : 26-34.
DOI: 10.1093/toxsci/kft230
Novák P., Hřibová E., Neumann P., Koblížková A., Doležel J., Macas J. (2014) Genome-wide analysis of repeat diversity across the family Musaceae PLoS ONE 9 : e98918.
DOI: 10.1371/journal.pone.0098918
Zhang H., Koblížková A., Wang K., Gong Z., Oliveira L., Torres G., Wu Y., Zhang W., Novák P., Buell C., Macas J., Jiang J. (2014) Boom-bust turnovers of megabase-sized centromeric DNA in Solanum species: Rapid evolution of DNA sequences associated with centromeres Plant Cell 26 : 1436-1447.
DOI: 10.1105/tpc.114.123877
Heckmann S., Macas J., Kumke K., Fuchs J., Schubert V., Ma L., Novák P., Neumann P., Taudien S., Platzer M., Houben A. (2013) The holocentric species Luzula elegans shows interplay between centromere and large-scale genome organization Plant Journal 73 : 555-565.
DOI: 10.1111/tpj.12054

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